>3D_helix;123
protein_name:KvAP potassium channel* (Aeropyrum pernix)
file_name:KvAP.txt
entry_date:13may03
refman_number:20977,20978,20979
endnote_number:
author:Jiang,Y.X., Lee,A., Chen,J.Y., Ruta,V., Cadene,M., Chait,B.T., MacKinnon,R.(2003) [X-ray structure of a voltage-dependent K+ channel] {Nature, 423, 33-41}
remarks:*The KvAP K-channel is complex. Of the 'tm segs' marked below, only tmsegs G and I are tmsegs in the usual sense. The others are associated with the pore helix and the voltage sensor domains. Using terminology from the Jiang et al. paper, the 'tmsegs' below have the following correspondence: A=S1, B=S2, C=S3a, D=S3b, E=S4, F=S4-S5 linker, G=S5, H=P, and I=S6.
pir_number:
Swiss_Prot_entry:below from TrEMBL
Swiss_Prot_number:Q9YDF8
Swiss_Prot_gene:APE0955
Swiss_Prot_name:295AA long hypothetical potassium channel
PDB_title:Voltage-Dependent Potassium Channel in complex with an Fab
PDB_Identifier:1ORQ
N_terminal:in
number_tmsegs:9
tm_segments:A.26,50;B.54,79;C.84,92;D.96,112;E.116,132;F.135,146;G.148,171;H.183,195;I.209,240
sequence:MARFRRGLSDLGGRVRNIGDVMEHPLVELGVSYAALLSVIVVVVEYTMQLSGEYLVRLYLVDLILVIILWADYAYRAYKSGDPAGYVKKTLYEIPALVPAGLLALIEGHLAGLGLFRLVRLLRFLRILLIISRGSKFLSAIADAADKIRFYHLFGAVMLTVLYGAFAIYIVEYPDPNSSIKSVFDALWWAVVTATTVGYGDVVPATPIGKVIGIAVMLTGISALTLLIGTVSNMFQKILVGEPEPSCSPAKLAEMVSSMSEEEFEEFVRTLKNLRRLENSMK*